Fitness data for HSERO_RS17020 in Herbaspirillum seropedicae SmR1
ABC transporter for D-sorbitol/xylitol, ATPase component (from data)
Original annotation: sugar ABC transporter ATP-binding protein
SEED: Glycerol-3-phosphate ABC transporter, ATP-binding protein UgpC (TC 3.A.1.1.3)
KEGG: multiple sugar transport system ATP-binding protein
Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)
Or see all 244 experiments or choose conditions
| group | condition | fitness | t score | |
|---|---|---|---|---|
| carbon source | Xylitol (C) | -4.1 | -8.9 | compare |
| carbon source | Xylitol (C) | -3.5 | -10.2 | compare |
| carbon source | D-Sorbitol (C) | -2.7 | -7.2 | compare |
| carbon source | D-Glucose (C) | -0.7 | -3.2 | compare |
| agar plate interaction | Parafilmed volatile agar plate with Trichoderma atroviridae IMI | -0.6 | -2.5 | compare |
| agar plate interaction control | Taped volatile agar plate with no fungus | -0.5 | -2.2 | compare |
| nutrient | Min media with glucose | -0.5 | -3.0 | compare |
| carbon source | L-Lactate (C) | -0.4 | -2.6 | compare |
| nutrient | L-Histidine | -0.4 | -2.1 | compare |
| agar plate interaction | Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant | -0.4 | -2.2 | compare |
| carbon source | D,L-Lactate (C) | -0.4 | -1.7 | compare |
| carbon source | D-Lactate (C) | -0.3 | -1.4 | compare |
| carbon source | D-Ribose (C) | -0.3 | -1.2 | compare |
| carbon source | L-Fucose (C) | -0.3 | -1.5 | compare |
| stress | Cisplatin 0.003 mg/ml | +0.3 | +1.3 | compare |
| agar plate interaction control | Parafilmed volatile agar plate with no fungus | +0.3 | +2.5 | compare |
| agar plate interaction | Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant | +0.3 | +1.4 | compare |
| plant | Control soil assay; outgrowth in LB | +0.4 | +1.4 | compare |
| control | NoPredeControl | +0.5 | +2.0 | compare |
| agar plate interaction control | Parafilmed volatile agar plate with no fungus | +1.0 | +2.0 | compare |