Fitness data for HSERO_RS17010 in Herbaspirillum seropedicae SmR1

ABC transporter for D-sorbitol/xylitol, permease component 2 (from data)
Original annotation: sugar ABC transporter permease
SEED: Various polyols ABC transporter, permease component 2
KEGG: multiple sugar transport system permease protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
carbon source D-Sorbitol (C) -2.7 -4.8 compare
carbon source Xylitol (C) -2.5 -6.1 compare
carbon source Xylitol (C) -1.1 -2.0 compare
control NoPredeControl -0.7 -1.5 compare
stress sodium fluoride 100 mM -0.7 -2.3 compare
agar plate interaction control Taped volatile agar plate with no fungus -0.6 -1.9 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -0.6 -1.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.5 -1.8 compare
stress Cobalt chloride 0.2 mM -0.5 -1.3 compare
stress A22 0.04 mg/ml -0.5 -1.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.5 +1.6 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X +0.5 +2.4 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.5 +1.5 compare
carbon source Carbon source 2-Deoxy-D-Ribose 5 mM +0.5 +1.5 compare
carbon source Carbon source 2-Deoxyadenosine 5-monophosphate 2.5 mM +0.5 +2.2 compare
supernatant control Vogels_fungal_media; pH 5.5 +0.6 +1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.6 +2.9 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X +0.8 +2.5 compare
carbon source Carbon source Deoxyribonucleic from herring sperm 5 mg/mL +0.8 +3.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.9 +1.7 compare