Fitness data for HSERO_RS17005 in Herbaspirillum seropedicae SmR1

ABC transporter for D-sorbitol/xylitol, permease component 1 (from data)
Original annotation: sugar ABC transporter permease
SEED: Various polyols ABC transporter, permease component 1
KEGG: multiple sugar transport system permease protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
carbon source D-Sorbitol (C) -3.8 -6.8 compare
carbon source Xylitol (C) -1.9 -2.9 compare
carbon source Xylitol (C) -1.4 -2.2 compare
agar plate interaction Taped volatile agar plate with Trichoderma atroviridae IMI -0.9 -3.1 compare
carbon source Carbon source 2-Deoxy-D-Ribose 5 mM -0.8 -3.1 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.8X; growth supplemented with 0.4X LB -0.8 -2.6 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -0.7 -1.8 compare
stress nitrite 20 mM -0.7 -2.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.6 -1.9 compare
stress A22 0.04 mg/ml -0.6 -2.0 compare
carbon source D-Glucose (C) +0.5 +1.5 compare
carbon source D-Glucose-6-Phosphate (C) +0.6 +2.5 compare
carbon source L-Malic (C) +0.6 +2.8 compare
vitamin No vitamins t2 +0.6 +2.2 compare
carbon source Glycerol (C) +0.6 +2.2 compare
carbon source D,L-Lactate (C) +0.7 +2.6 compare
carbon source L-Asparagine (C) +0.7 +3.3 compare
carbon source L-Fucose (C) +0.7 +3.0 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.8 +1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.8 +1.0 compare