Fitness data for HSERO_RS17000 in Herbaspirillum seropedicae SmR1

ABC transporter for D-sorbitol/xylitol, substrate-binding component (from data)
Original annotation: sugar ABC transporter substrate-binding protein
SEED: Various polyols ABC transporter, periplasmic substrate-binding protein
KEGG: multiple sugar transport system substrate-binding protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
carbon source D-Sorbitol (C) -2.3 -7.7 compare
carbon source Xylitol (C) -2.0 -6.0 compare
carbon source Xylitol (C) -2.0 -6.3 compare
carbon source D-Galactose (C) -0.6 -2.0 compare
vitamin With vitamins t1 -0.6 -2.3 compare
agar plate interaction Taped volatile agar plate with Trichoderma atroviridae IMI -0.5 -1.9 compare
carbon source D-Glucose-6-Phosphate (C) -0.5 -1.7 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.8X; growth supplemented with 0.4X LB -0.4 -1.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.4 +1.8 compare
carbon source D-Mannose (C) +0.4 +1.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.4 +2.0 compare
stress Lomefloxacin 0.012 mM +0.4 +1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.4 +0.9 compare
stress nitrate 200 mM +0.4 +1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.5 +1.1 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.5 +2.7 compare
carbon source L-Malic (C) +0.6 +3.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.7 +1.4 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.7 +1.2 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.7 +1.6 compare