Fitness data for HSERO_RS16985 in Herbaspirillum seropedicae SmR1

nitrate ABC transporter substrate-binding protein
SEED: ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
stress Lomefloxacin 0.012 mM -1.1 -2.4 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -0.5 -2.6 compare
agar plate interaction Taped volatile agar plate with Trichoderma atroviridae IMI -0.5 -1.9 compare
agar plate interaction Taped volatile agar plate with Trichoderma atroviridae IMI -0.4 -1.9 compare
carbon source L-Proline (C) -0.4 -1.9 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X +0.3 +2.4 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.2X +0.3 +1.7 compare
carbon source D-Galacturonic Acid (C) +0.4 +1.8 compare
carbon source L-Arabinose (C) +0.4 +1.6 compare
stress Nickel (II) chloride 0.6 mM +0.4 +1.6 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.8X +0.4 +2.6 compare
stress nitrite 20 mM +0.4 +2.3 compare
nitrogen source L-Proline (N) +0.4 +2.1 compare
stress nitrate 200 mM +0.4 +1.7 compare
carbon source L-Asparagine (C) +0.5 +2.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.5 +1.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.5 +1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.6 +1.6 compare
supernatant control Vogels_fungal_media 0.1X +0.6 +3.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.8 +1.2 compare