Fitness data for HSERO_RS16935 in Herbaspirillum seropedicae SmR1

membrane protein
SEED: Probable transmembrane protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.7)


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group condition fitness t score  
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -1.1 -2.2 compare
carbon source D,L-Lactate (C) -1.0 -3.0 compare
plant Control soil assay; outgrowth in LB -0.9 -2.2 compare
carbon source Glycerol (C) -0.9 -1.3 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.8 -1.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.8 -2.0 compare
carbon source D-Lactate (C) -0.8 -2.0 compare
carbon source L-Fucose (C) -0.7 -2.1 compare
carbon source pyruvate (C) -0.7 -1.7 compare
carbon source L-Fucose (C) -0.7 -1.3 compare
carbon source L-Rhamnose (C) -0.7 -1.3 compare
carbon source D-Galactose (C) +0.7 +2.4 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.7 +1.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.7 +1.8 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.8X; growth supplemented with 0.4X LB +0.8 +1.4 compare
carbon source D-Galacturonic Acid (C) +0.8 +2.7 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.8 +2.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.9 +3.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +1.0 +1.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +2.2 +1.4 compare