Fitness data for HSERO_RS16875 in Herbaspirillum seropedicae SmR1

diguanylate cyclase
SEED: diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
carbon source D-Gluconic Acid (C) -0.7 -1.8 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -0.6 -1.5 compare
carbon source D-Galactose (C) -0.6 -2.0 compare
carbon source D-Glucose (C) -0.6 -1.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.5 +1.0 compare
supernatant control Vogels_fungal_media 0.1X +0.5 +1.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.5 +1.1 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.6 +0.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.6 +2.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.6 +1.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.6 +1.0 compare
agar plate interaction control Taped volatile agar plate with no fungus +0.6 +1.1 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.5X; growth supplemented with 0.4X LB +0.7 +1.6 compare
carbon source L-Proline (C) +0.7 +3.1 compare
supernatant control Vogels_fungal_media 0.5X; growth supplemented with 0.4X LB +0.7 +1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.7 +1.1 compare
agar plate interaction Taped volatile agar plate with Trichoderma atroviridae IMI +0.8 +1.1 compare
supernatant control Vogels_fungal_media; pH 5.5 +0.9 +1.4 compare
agar plate interaction Taped volatile agar plate with Trichoderma atroviridae IMI +1.0 +1.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +1.1 +1.4 compare