Fitness data for HSERO_RS16870 in Herbaspirillum seropedicae SmR1

D-alanyl-D-alanine carboxypeptidase
SEED: D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)
KEGG: D-alanyl-D-alanine carboxypeptidase / D-alanyl-D-alanine-endopeptidase (penicillin-binding protein 4)

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
stress Fusidic 0.025 mg/ml -1.0 -2.9 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.8X; growth supplemented with 0.4X LB -0.7 -2.2 compare
carbon source D-Mannose (C) -0.7 -3.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.6 -2.5 compare
carbon source D-Mannose (C) -0.6 -1.4 compare
carbon source L-Asparagine (C) -0.6 -2.2 compare
carbon source L-Arabinose (C) -0.5 -2.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.4 -2.7 compare
carbon source L-Asparagine (C) -0.4 -2.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.4 -1.9 compare
carbon source D-Glucose (C) -0.4 -1.1 compare
carbon source D-Ribose (C) -0.4 -2.1 compare
carbon source D-Glucose-6-Phosphate (C) -0.4 -1.0 compare
carbon source m-Inositol (C) -0.4 -2.0 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.5X; growth supplemented with 0.4X LB -0.4 -1.4 compare
carbon source L-Glutamine (C) +0.4 +1.7 compare
stress Thallium(I) acetate 0.001 mg/ml +0.4 +1.5 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.5 +2.1 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.8 +1.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.9 +1.4 compare