Fitness data for HSERO_RS16825 in Herbaspirillum seropedicae SmR1

NADP-dependent malic enzyme oxidoreductase
SEED: NADP-dependent malic enzyme (EC 1.1.1.40)
KEGG: malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+)

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.9)


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group condition fitness t score  
supernatant control Vogels_fungal_media; pH 5.5 -4.0 -2.3 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.2X; growth supplemented with 0.4X LB -3.7 -2.0 compare
control NoPredeControl -3.2 -1.3 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X -3.0 -2.3 compare
stress Sisomicin 0.125 mg/ml -3.0 -1.9 compare
micoeukaryotes C.elegans, mixed culture-2 -3.0 -2.0 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -2.8 -1.9 compare
nitrogen fixation control L-Malic (C) with ammonium chloride; anaerobic; 8 days -2.7 -2.6 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X -2.7 -3.1 compare
stress Cisplatin 0.003 mg/ml -2.3 -2.3 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -2.1 -1.6 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -2.1 -1.6 compare
supernatant control Vogels_fungal_media 0.5X; growth supplemented with 0.4X LB -2.0 -1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -2.0 -1.5 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -1.9 -1.6 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.5X; growth supplemented with 0.4X LB -1.9 -1.7 compare
carbon source D-Mannose (C) +1.9 +4.3 compare
stress Fusidic 0.025 mg/ml +2.0 +5.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +2.1 +4.0 compare
carbon source D-Galacturonic Acid (C) +2.1 +5.6 compare