Fitness data for HSERO_RS16810 in Herbaspirillum seropedicae SmR1

Fis family transcriptional regulator
SEED: Nitrogen regulation protein NR(I)
KEGG: two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
carbon source a-Ketoglutaric (C) -2.5 -8.2 compare
carbon source a-Ketoglutaric (C) -2.3 -5.5 compare
supernatant control Vogels_fungal_media; pH 5.5 -1.0 -1.9 compare
control NoPredeControl -0.8 -1.6 compare
carbon source D,L-Lactate (C) -0.7 -2.8 compare
stress Fusidic 0.025 mg/ml -0.7 -2.1 compare
carbon source pyruvate (C) -0.6 -2.3 compare
carbon source L-Asparagine (C) -0.6 -3.2 compare
nitrogen fixation control L-Malic (C) with ammonium chloride; anaerobic; 8 days -0.5 -3.7 compare
micoeukaryotes Acanthamoeba sp., muxed culture-1 -0.5 -1.7 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.8X; growth supplemented with 0.4X LB +0.6 +2.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.6 +1.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.6 +1.5 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.7 +1.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.7 +1.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.7 +1.9 compare
agar plate interaction Taped volatile agar plate with Trichoderma atroviridae IMI +0.7 +2.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.7 +1.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.9 +2.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +2.3 +1.8 compare