Fitness data for HSERO_RS16745 in Herbaspirillum seropedicae SmR1

gluconate 2-dehydrogenase
SEED: Gluconate 2-dehydrogenase (EC 1.1.99.3), membrane-bound, gamma subunit
KEGG: gluconate 2-dehydrogenase gamma chain

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
carbon source D,L-Lactate (C) -2.0 -8.1 compare
carbon source D,L-Lactate (C) -1.8 -9.8 compare
stress Chloride stress -1.7 -6.6 compare
stress Chloride stress -1.6 -6.4 compare
nitrogen source Ammonium chloride (N); low aeration -0.7 -2.8 compare
carbon source D,L-Malic Acid (C) -0.6 -2.1 compare
nitrogen source nitrate (N); low aeration -0.6 -2.9 compare
nitrogen source nitrate (N); high aeration -0.5 -2.7 compare
carbon source D-Sorbitol (C) -0.5 -1.7 compare
carbon source m-Inositol (C) -0.5 -2.1 compare
carbon source D-Galactose (C) -0.5 -1.9 compare
nitrogen source Ammonium chloride (N); high aeration -0.4 -1.8 compare
carbon source L-Rhamnose (C) -0.4 -1.5 compare
carbon source D-Lactate (C) -0.4 -1.5 compare
nitrogen source nitrate (N); low aeration -0.4 -1.9 compare
plant Control soil assay; outgrowth in LB -0.4 -1.1 compare
vitamin No vitamins t1 +0.4 +2.0 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.8X +0.5 +1.9 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X +0.5 +1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.5 +1.1 compare