Fitness data for HSERO_RS16740 in Herbaspirillum seropedicae SmR1

GMC family oxidoreductase
SEED: Gluconate 2-dehydrogenase (EC 1.1.99.3), membrane-bound, flavoprotein
KEGG: gluconate 2-dehydrogenase alpha chain

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
carbon source D,L-Lactate (C) -2.2 -9.1 compare
carbon source D,L-Lactate (C) -2.1 -11.8 compare
stress Chloride stress -1.5 -7.1 compare
stress Chloride stress -1.3 -6.4 compare
agar plate interaction control Taped volatile agar plate with no fungus -0.7 -3.0 compare
supernatant control Vogels_fungal_media; pH 5.5 -0.5 -3.1 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X -0.5 -2.6 compare
nitrogen source nitrate (N); low aeration -0.4 -2.5 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.8X; growth supplemented with 0.4X LB -0.4 -1.9 compare
supernatant control Vogels_fungal_media 0.5X; growth supplemented with 0.4X LB -0.4 -2.0 compare
nitrogen source Ammonium chloride (N); low aeration -0.4 -2.0 compare
nitrogen source nitrate (N); high aeration -0.4 -2.6 compare
agar plate interaction control Taped volatile agar plate with no fungus -0.4 -1.8 compare
supernatant control Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB -0.3 -2.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.3 -2.0 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.3 -1.5 compare
stress Nickel (II) chloride 0.6 mM +0.3 +1.7 compare
carbon source L-Asparagine (C) +0.4 +2.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.4 +1.7 compare
stress Lomefloxacin 0.012 mM +0.5 +3.0 compare