Fitness data for HSERO_RS16705 in Herbaspirillum seropedicae SmR1

dihydroxy-acid dehydratase
SEED: L-arabonate dehydratase (EC 4.2.1.25)
KEGG: dihydroxy-acid dehydratase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
carbon source D-Galactose (C) -0.6 -2.3 compare
carbon source L-Fucose (C) -0.4 -1.7 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.2X; growth supplemented with 0.4X LB -0.4 -1.5 compare
micoeukaryotes Acanthamoeba sp., muxed culture-2 -0.4 -1.6 compare
plant Control soil assay; outgrowth in LB -0.4 -1.2 compare
carbon source D-Galactose (C) -0.4 -1.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.4 +1.5 compare
carbon source Glycerol (C) +0.4 +1.6 compare
carbon source D-Xylose (C) +0.4 +2.0 compare
stress Thallium(I) acetate 0.001 mg/ml +0.4 +2.1 compare
carbon source D,L-Lactate (C) +0.4 +1.9 compare
stress Cisplatin 0.003 mg/ml +0.4 +1.8 compare
carbon source D-Xylose (C) +0.4 +2.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.5 +1.5 compare
agar plate interaction control Taped volatile agar plate with no fungus +0.5 +2.1 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.6 +2.2 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.7 +2.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.7 +1.1 compare
carbon source L-Fucose (C) +3.3 +17.9 compare
carbon source L-Fucose (C) +3.4 +19.8 compare