Fitness data for HSERO_RS16680 in Herbaspirillum seropedicae SmR1

GntR family transcriptional regulator

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
stress Lomefloxacin 0.012 mM -1.8 -2.7 compare
stress Sisomicin 0.125 mg/ml -1.3 -2.1 compare
agar plate interaction Taped volatile agar plate with Trichoderma atroviridae IMI -0.6 -1.6 compare
nitrogen source Ammonium chloride (N); low aeration +0.6 +1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.6 +1.1 compare
stress Dimethyl Sulfoxide 5 vol% +0.6 +0.8 compare
nutrient casaminos +0.6 +1.9 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.6 +1.2 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.8X +0.6 +1.9 compare
nutrient L-Serine +0.6 +1.3 compare
stress Chloride stress +0.6 +1.3 compare
carbon source D,L-Lactate (C) +0.7 +1.3 compare
plant Control soil assay; outgrowth in LB +0.7 +1.1 compare
vitamin No vitamins t1 +0.7 +2.4 compare
vitamin With vitamins t2 +0.7 +2.5 compare
nitrogen source Ammonium chloride (N); low aeration +0.8 +1.7 compare
carbon source D-Galactose (C) +0.8 +2.3 compare
carbon source L-Fucose (C) +0.8 +4.4 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.9 +1.9 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +1.2 +1.9 compare