Fitness data for HSERO_RS16570 in Herbaspirillum seropedicae SmR1

membrane protein
SEED: diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.5 -1.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.3 +1.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.3 +1.5 compare
carbon source L-Arabinose (C) +0.3 +1.6 compare
agar plate interaction control Taped volatile agar plate with no fungus +0.3 +1.8 compare
carbon source L-Fucose (C) +0.3 +2.0 compare
supernatant control Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB +0.3 +2.0 compare
carbon source L-Lactate (C) +0.3 +2.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.3 +1.8 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.2X; growth supplemented with 0.4X LB +0.4 +2.0 compare
micoeukaryotes Dictyostellum sp.mixed culture-2 +0.4 +2.6 compare
supernatant control Vogels_fungal_media 0.1X +0.4 +2.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.4 +1.7 compare
agar plate interaction Taped volatile agar plate with Trichoderma atroviridae IMI +0.4 +2.0 compare
nitrogen fixation control L-Malic (C) with ammonium chloride; anaerobic; 8 days +0.4 +2.9 compare
carbon source m-Inositol (C) +0.4 +2.1 compare
carbon source L-Fucose (C) +0.4 +2.3 compare
nitrogen fixation control D-Glucose (C) with ammonium chloride; anaerobic; 8 days +0.5 +2.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.5 +2.3 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.5 +2.6 compare