Fitness data for HSERO_RS16555 in Herbaspirillum seropedicae SmR1

membrane protein
SEED: Probable transmembrane protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
nitrogen fixation control L-Malic (C) with ammonium chloride; anaerobic; 8 days -1.2 -4.6 compare
carbon source D-Glucose-6-Phosphate (C) -1.0 -4.0 compare
carbon source D-Mannose (C) -0.9 -3.8 compare
carbon source D-Glucose-6-Phosphate (C) -0.9 -4.7 compare
carbon source Xylitol (C) -0.8 -2.6 compare
carbon source D-Lactate (C) -0.8 -2.5 compare
nitrogen fixation control L-Malic (C) with ammonium chloride; anaerobic; 8 days -0.8 -2.9 compare
nitrogen fixation control D-Glucose (C) with ammonium chloride; anaerobic; 3 days -0.7 -4.3 compare
nitrogen fixation control D-Glucose (C) with ammonium chloride; anaerobic; 3 days -0.6 -2.8 compare
carbon source succinate (C) -0.6 -2.2 compare
nitrogen fixation control L-Malic (C) with ammonium chloride; anaerobic; 3 days -0.6 -2.1 compare
carbon source D-Ribose (C) -0.6 -3.0 compare
carbon source D-Mannose (C) -0.5 -2.5 compare
nitrogen fixation D-Glucose (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic; 8 days -0.5 -3.0 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -0.5 -1.8 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.8X -0.5 -2.5 compare
micoeukaryotes Dictyostellum sp.mixed culture-1 +0.5 +2.6 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.5 +2.4 compare
control NoPredeControl +0.8 +2.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.9 +0.9 compare