Fitness data for HSERO_RS16550 in Herbaspirillum seropedicae SmR1

NAD(P)H quinone oxidoreductase
SEED: Flavoprotein WrbA
KEGG: Trp repressor binding protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
carbon source L-Lactate (C) -1.1 -5.4 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -1.0 -3.1 compare
carbon source L-Proline (C) -0.9 -3.6 compare
carbon source L-Rhamnose (C) -0.9 -2.9 compare
carbon source D-Xylose (C) -0.8 -2.6 compare
nutrient L-Serine -0.8 -2.3 compare
carbon source D,L-Lactate (C) -0.8 -3.1 compare
nitrogen fixation control D-Glucose (C) with ammonium chloride; anaerobic; 3 days -0.7 -2.7 compare
carbon source D-Galactose (C) -0.7 -2.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.7 -2.2 compare
carbon source D-Glucose (C) -0.6 -2.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.6 -1.7 compare
vitamin No vitamins t2 -0.6 -2.6 compare
nutrient Min media with glucose -0.5 -3.6 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -0.5 -2.2 compare
carbon source Xylitol (C) -0.5 -2.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.5 -3.3 compare
stress Cobalt chloride 0.2 mM +0.5 +2.3 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.2X +0.5 +1.7 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.9 +1.4 compare