Fitness data for HSERO_RS16540 in Herbaspirillum seropedicae SmR1

membrane protein
SEED: FIG027190: Putative transmembrane protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


Add gene:

Or see all 244 experiments or choose conditions

group condition fitness t score  
carbon source D-Mannose (C) -1.1 -2.3 compare
carbon source D-Galactose (C) -0.8 -1.9 compare
carbon source D-Galactose (C) -0.8 -2.4 compare
carbon source Glycerol (C) -0.7 -1.7 compare
carbon source D-Galacturonic Acid (C) -0.7 -2.1 compare
supernatant control Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB -0.7 -1.6 compare
carbon source D-Ribose (C) -0.7 -2.1 compare
carbon source L-Rhamnose (C) -0.7 -1.7 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.5X; growth supplemented with 0.4X LB -0.6 -2.5 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.6 -1.3 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.5X; growth supplemented with 0.4X LB -0.6 -2.0 compare
supernatant control Vogels_fungal_media 0.5X; growth supplemented with 0.4X LB -0.6 -1.8 compare
carbon source L-Asparagine (C) -0.5 -1.8 compare
carbon source D-Gluconic Acid (C) -0.5 -1.9 compare
control NoPredeControl +0.5 +1.0 compare
nitrogen source Ammonium chloride (N); high aeration +0.6 +2.4 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.6 +1.8 compare
carbon source D,L-Lactate (C) +0.6 +1.6 compare
nitrogen source nitrate (N); low aeration +0.9 +3.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +1.1 +2.0 compare