Fitness data for HSERO_RS16435 in Herbaspirillum seropedicae SmR1

LOG family protein
SEED: Lysine decarboxylase family

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


Add gene:

Or see all 244 experiments or choose conditions

group condition fitness t score  
stress Lomefloxacin 0.012 mM -0.8 -2.3 compare
carbon source Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM -0.7 -2.7 compare
plant Control soil assay; outgrowth in LB -0.5 -1.7 compare
carbon source D-Lactate (C) -0.5 -1.7 compare
carbon source D-Glucose-6-Phosphate (C) -0.5 -1.8 compare
carbon source D-Ribose (C) -0.5 -1.5 compare
plant Control soil assay; outgrowth in LB -0.5 -2.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.5 -2.2 compare
carbon source L-Rhamnose (C) -0.5 -1.3 compare
carbon source Glycerol (C) -0.5 -1.4 compare
carbon source D-Gluconic Acid (C) -0.4 -1.4 compare
carbon source Glycerol (C) -0.4 -2.0 compare
vitamin With vitamins t1 +0.4 +1.5 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.4 +2.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.4 +1.7 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.5 +1.5 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.5 +1.9 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.6 +1.6 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.6 +1.9 compare
nitrogen fixation control D-Glucose (C) with ammonium chloride; anaerobic; 8 days +0.7 +3.3 compare