Fitness data for HSERO_RS16300 in Herbaspirillum seropedicae SmR1

peptidase M20
SEED: N-carbamoyl-L-amino acid hydrolase (EC 3.5.1.87)
KEGG: allantoate deiminase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
carbon source L-Arabinose (C) -2.2 -3.9 compare
carbon source Carbon source 2-Deoxyadenosine 5-monophosphate 2.5 mM -2.0 -5.8 compare
carbon source Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM -2.0 -5.9 compare
carbon source Carbon source 2-Deoxyadenosine 5-monophosphate 2.5 mM -2.0 -6.2 compare
carbon source Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM -1.8 -4.8 compare
agar plate interaction control Taped volatile agar plate with no fungus -0.9 -3.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.7 -1.8 compare
carbon source D-Gluconic Acid (C) -0.7 -2.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.6 -2.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.6 -2.5 compare
carbon source D-Glucose-6-Phosphate (C) -0.6 -1.8 compare
carbon source Carbon source Deoxyribonucleic from herring sperm 5 mg/mL -0.6 -2.3 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -0.5 -1.9 compare
plant Control soil assay; outgrowth in LB -0.5 -1.7 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.5 -2.6 compare
carbon source D,L-Lactate (C) -0.5 -2.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.5 +1.8 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.8X; growth supplemented with 0.4X LB +0.5 +1.8 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.2X; growth supplemented with 0.4X LB +0.6 +2.7 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.5X; growth supplemented with 0.4X LB +0.7 +2.7 compare