Fitness data for HSERO_RS16295 in Herbaspirillum seropedicae SmR1

LysR family transcriptional regulator
SEED: Transcriptional regulator, LysR family

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
carbon source Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM -0.8 -2.8 compare
carbon source Carbon source 2-Deoxyadenosine 5-monophosphate 2.5 mM -0.8 -3.8 compare
carbon source Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM -0.8 -3.7 compare
carbon source Carbon source 2-Deoxyadenosine 5-monophosphate 2.5 mM -0.7 -3.1 compare
carbon source D-Lactate (C) -0.6 -1.4 compare
plant Control soil assay; outgrowth in LB -0.6 -1.6 compare
carbon source D-Galactose (C) -0.5 -1.8 compare
carbon source Glycerol (C) -0.5 -1.8 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.5 -1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.5 -1.6 compare
carbon source L-Lactate (C) -0.5 -2.0 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -0.5 -1.9 compare
stress sodium fluoride 100 mM -0.5 -1.5 compare
agar plate interaction Taped volatile agar plate with Trichoderma atroviridae IMI -0.5 -1.5 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -0.5 -1.8 compare
carbon source D-Ribose (C) -0.5 -1.6 compare
carbon source L-Asparagine (C) +0.5 +2.5 compare
nitrogen fixation control D-Glucose (C) with ammonium chloride; anaerobic; 8 days +0.5 +2.4 compare
nitrogen fixation control D-Glucose (C) with ammonium chloride; anaerobic; 3 days +0.5 +3.3 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.7 +1.7 compare