Fitness data for HSERO_RS16195 in Herbaspirillum seropedicae SmR1

RNA polymerase sigma factor
SEED: RNA polymerase sigma-70 factor, ECF subfamily
KEGG: RNA polymerase sigma-70 factor, ECF subfamily

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
carbon source L-Fucose (C) -1.0 -2.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.8 -2.2 compare
plant Control soil assay; outgrowth in LB -0.8 -1.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.7 -1.7 compare
carbon source D-Glucose (C) -0.7 -2.0 compare
carbon source L-Asparagine (C) -0.7 -2.7 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -0.7 -1.7 compare
carbon source D-Galactose (C) -0.7 -2.0 compare
carbon source a-Ketoglutaric (C) -0.6 -1.9 compare
carbon source L-Arabinose (C) -0.6 -1.4 compare
carbon source L-Glutamine (C) -0.6 -2.2 compare
carbon source D-Glucose-6-Phosphate (C) -0.6 -2.3 compare
stress Fusidic 0.025 mg/ml -0.6 -1.7 compare
carbon source D-Glucose (C) -0.6 -1.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.6 +1.8 compare
stress Sisomicin 0.125 mg/ml +0.8 +2.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.8 +1.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.8 +1.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +2.2 +1.7 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +2.6 +1.5 compare