Fitness data for HSERO_RS15955 in Herbaspirillum seropedicae SmR1

ABC transporter substrate-binding protein
SEED: Dipeptide-binding ABC transporter, periplasmic substrate-binding component (TC 3.A.1.5.2)
KEGG: peptide/nickel transport system substrate-binding protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
stress Sisomicin 0.125 mg/ml -1.0 -2.3 compare
stress Lomefloxacin 0.012 mM -0.6 -2.2 compare
nitrogen fixation control D-Glucose (C) with ammonium chloride; anaerobic; 3 days -0.6 -3.8 compare
carbon source D-Glucose (C) -0.5 -1.6 compare
carbon source L-Malic (C) -0.5 -2.8 compare
control NoPredeControl -0.4 -1.3 compare
stress nitrate 200 mM -0.4 -2.0 compare
carbon source D-Galactose (C) +0.4 +2.0 compare
carbon source Xylitol (C) +0.4 +1.7 compare
vitamin No vitamins t1 +0.4 +2.1 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X +0.4 +2.5 compare
nitrogen source Ammonium chloride (N); low aeration +0.4 +2.9 compare
nitrogen source nitrate (N); low aeration +0.4 +2.3 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.4 +1.6 compare
plant Control soil assay; outgrowth in LB +0.4 +1.7 compare
vitamin No vitamins t2 +0.4 +2.0 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.6 +1.5 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X +0.7 +3.2 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.7 +1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +1.1 +1.7 compare