Fitness data for HSERO_RS15950 in Herbaspirillum seropedicae SmR1

ABC transporter permease
SEED: Dipeptide transport system permease protein DppB (TC 3.A.1.5.2)
KEGG: peptide/nickel transport system permease protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
agar plate interaction control Taped volatile agar plate with no fungus -0.9 -2.6 compare
supernatant control Vogels_fungal_media 0.5X; growth supplemented with 0.4X LB -0.6 -1.8 compare
stress Thallium(I) acetate 0.001 mg/ml -0.5 -1.5 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.5 -1.8 compare
stress nitrate 200 mM -0.5 -1.2 compare
carbon source m-Inositol (C) -0.5 -1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.5 +1.3 compare
carbon source succinate (C) +0.5 +1.1 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.8X +0.5 +2.6 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.5 +1.6 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X +0.5 +2.1 compare
carbon source L-Lactate (C) +0.5 +1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.6 +1.2 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.6 +1.7 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.6 +1.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.6 +1.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.7 +1.9 compare
carbon source Xylitol (C) +0.8 +2.0 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.9 +2.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +1.3 +2.3 compare