Fitness data for HSERO_RS15795 in Herbaspirillum seropedicae SmR1

galactaro-1,5-lactonase (from data)
Original annotation: 6-phosphogluconolactonase
SEED: 6-phosphogluconolactonase (EC 3.1.1.31)
KEGG: 6-phosphogluconolactonase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
carbon source D-Galacturonic Acid (C) -4.1 -6.6 compare
carbon source D-Galacturonic Acid (C) -3.0 -6.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -1.1 -2.1 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.8X -0.8 -2.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.7 -1.9 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X -0.7 -3.1 compare
stress Cobalt chloride 0.2 mM -0.7 -1.9 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X -0.6 -2.4 compare
carbon source D-Glucose (C) +0.6 +2.1 compare
carbon source D-Glucose-6-Phosphate (C) +0.6 +2.2 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.6 +2.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.6 +0.9 compare
micoeukaryotes Acanthamoeba sp., muxed culture-2 +0.6 +1.9 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.7 +2.2 compare
carbon source D,L-Malic Acid (C) +0.7 +2.4 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.7 +1.1 compare
carbon source L-Rhamnose (C) +0.7 +1.9 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.8 +1.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.8 +1.9 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.9 +1.5 compare