Fitness data for HSERO_RS15785 in Herbaspirillum seropedicae SmR1

5-dehydro-4-deoxyglucarate dehydratase (EC 4.2.1.41) (from data)
Original annotation: 5-dehydro-4-deoxyglucarate dehydratase
SEED: 5-dehydro-4-deoxyglucarate dehydratase (EC 4.2.1.41)
KEGG: 5-dehydro-4-deoxyglucarate dehydratase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
carbon source D-Galacturonic Acid (C) -5.8 -9.9 compare
carbon source D-Galacturonic Acid (C) -4.3 -10.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.5 -2.4 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.5X; growth supplemented with 0.4X LB -0.5 -2.2 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X -0.4 -2.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.4 -2.5 compare
carbon source D-Ribose (C) -0.4 -2.0 compare
r2a control R2A control -0.4 -2.3 compare
r2a control R2A control -0.4 -2.7 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.4 -1.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.4 -2.4 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.8X; growth supplemented with 0.4X LB -0.4 -1.5 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.2X; growth supplemented with 0.4X LB -0.4 -2.4 compare
carbon source Carbon source 2-Deoxy-D-Ribose 5 mM -0.4 -2.3 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.4 -2.0 compare
carbon source D-Glucose-6-Phosphate (C) -0.4 -1.3 compare
carbon source Xylitol (C) -0.4 -1.5 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.8X -0.3 -1.9 compare
stress Lomefloxacin 0.012 mM +0.4 +1.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.5 +0.8 compare