Fitness data for HSERO_RS15665 in Herbaspirillum seropedicae SmR1

propionate catabolism operon regulatory protein PrpR
SEED: Propionate catabolism operon regulatory protein PrpR
KEGG: transcriptional regulator, propionate catabolism operon regulatory protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 2.5)


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group condition fitness t score  
agar plate interaction control Parafilmed volatile agar plate with no fungus -3.9 -0.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -3.8 -1.0 compare
plant Control soil assay; outgrowth in LB -3.6 -1.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -3.6 -1.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -3.5 -0.9 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -3.5 -1.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -3.5 -0.9 compare
micoeukaryotes Acanthamoeba sp., muxed culture-1 -3.5 -1.6 compare
agar plate interaction control Taped volatile agar plate with no fungus -3.4 -0.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -3.4 -1.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -3.4 -1.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -3.4 -0.9 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X -3.3 -1.1 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -3.3 -0.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -3.3 -0.9 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.8X; growth supplemented with 0.4X LB -3.3 -0.8 compare
supernatant control Vogels_fungal_media; pH 5.5 -3.3 -0.8 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.5X; growth supplemented with 0.4X LB -3.3 -1.1 compare
micoeukaryotes C.elegans, mixed culture-1 -3.2 -1.3 compare
stress Cobalt chloride 0.2 mM -2.5 -1.5 compare