Fitness data for HSERO_RS15505 in Herbaspirillum seropedicae SmR1

hypothetical protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
carbon source D-Glucose-6-Phosphate (C) -1.0 -3.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.8 -2.1 compare
carbon source D-Ribose (C) -0.8 -1.9 compare
plant Control soil assay; outgrowth in LB -0.7 -1.6 compare
nitrogen fixation control D-Glucose (C) with ammonium chloride; anaerobic; 8 days -0.7 -3.1 compare
plant Control soil assay; outgrowth in LB -0.6 -1.7 compare
carbon source L-Fucose (C) -0.6 -3.3 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -0.6 -1.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.5 -2.0 compare
carbon source D-Galactose (C) -0.5 -1.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.5 +1.2 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.5X; growth supplemented with 0.4X LB +0.5 +1.2 compare
agar plate interaction control Taped volatile agar plate with no fungus +0.5 +1.4 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.5 +1.8 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.5X; growth supplemented with 0.4X LB +0.6 +1.5 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.7 +1.6 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.7 +2.2 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.7 +1.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +1.1 +1.5 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +1.7 +1.8 compare