Fitness data for HSERO_RS15500 in Herbaspirillum seropedicae SmR1

ABC transporter permease
SEED: Glycerol-3-phosphate ABC transporter, permease protein UgpE (TC 3.A.1.1.3)
KEGG: sn-glycerol 3-phosphate transport system permease protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
carbon source D-Xylose (C) -0.4 -1.4 compare
plant Control soil assay; outgrowth in LB -0.4 -1.4 compare
carbon source Carbon source Phenylacetic 5 mM -0.3 -2.1 compare
stress A22 0.02 mg/ml -0.3 -1.6 compare
supernatant control Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB -0.3 -2.0 compare
stress Chloride stress -0.3 -1.8 compare
agar plate interaction Taped volatile agar plate with Trichoderma atroviridae IMI -0.3 -1.5 compare
stress sodium fluoride 100 mM -0.3 -1.2 compare
carbon source D-Ribose (C) -0.3 -1.3 compare
carbon source Carbon source D-Glucose 20 mM -0.3 -1.7 compare
nitrogen fixation control D-Glucose (C) with ammonium chloride; anaerobic; 8 days -0.3 -1.5 compare
micoeukaryotes Dictyostellum sp.mixed culture-1 +0.3 +1.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.3 +1.6 compare
vitamin No vitamins t1 +0.3 +1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.4 +1.6 compare
carbon source pyruvate (C) +0.4 +2.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.4 +1.5 compare
vitamin No vitamins t2 +0.4 +2.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.4 +1.8 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.4 +2.6 compare