Fitness data for HSERO_RS15485 in Herbaspirillum seropedicae SmR1

ABC transporter ATP-binding protein
SEED: Glycerol-3-phosphate ABC transporter, ATP-binding protein UgpC (TC 3.A.1.1.3)
KEGG: sn-glycerol 3-phosphate transport system ATP-binding protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.7 -1.4 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -0.7 -2.1 compare
carbon source D-Gluconic Acid (C) -0.6 -2.2 compare
carbon source Glycerol (C) -0.6 -1.2 compare
stress Fusidic 0.025 mg/ml -0.5 -1.8 compare
micoeukaryotes C.elegans, mixed culture-1 -0.5 -1.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.5 -1.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.5 -1.7 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.8X; growth supplemented with 0.4X LB +0.5 +0.9 compare
micoeukaryotes Acanthamoeba sp., muxed culture-1 +0.5 +1.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.5 +2.5 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.5 +1.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.6 +1.6 compare
agar plate interaction Taped volatile agar plate with Trichoderma atroviridae IMI +0.6 +1.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.7 +1.8 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.7 +1.3 compare
vitamin No vitamins t1 +0.7 +2.9 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X +0.8 +1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.9 +1.2 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +1.1 +1.5 compare