Fitness data for HSERO_RS15420 in Herbaspirillum seropedicae SmR1

RNA polymerase subunit sigma-24
SEED: DNA-directed RNA polymerase specialized sigma subunit, sigma24-like

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
carbon source L-Arabinose (C) -0.8 -3.0 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.5X; growth supplemented with 0.4X LB -0.6 -2.5 compare
carbon source Glycerol (C) -0.5 -1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.5 -2.2 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -0.5 -1.7 compare
r2a control R2A control -0.5 -1.9 compare
carbon source L-Fucose (C) -0.4 -1.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.4 -1.2 compare
carbon source L-Rhamnose (C) +0.4 +1.5 compare
stress A22 0.04 mg/ml +0.5 +2.4 compare
carbon source L-Fucose (C) +0.5 +1.8 compare
carbon source L-Malic (C) +0.5 +1.3 compare
carbon source L-Malic (C) +0.5 +2.0 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.5 +1.5 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.5 +2.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.5 +1.3 compare
agar plate interaction Taped volatile agar plate with Trichoderma atroviridae IMI +0.6 +2.2 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.7 +1.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.9 +1.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +1.0 +1.5 compare