Fitness data for HSERO_RS15405 in Herbaspirillum seropedicae SmR1

LysR family transcriptional regulator
SEED: Transcriptional regulator, LysR family

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.4 -1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.4 -1.9 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -0.3 -1.2 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X +0.3 +1.9 compare
carbon source D-Gluconic Acid (C) +0.3 +1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.4 +1.7 compare
carbon source Carbon source 2-Deoxy-D-Ribose 5 mM +0.4 +2.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.4 +1.4 compare
carbon source Xylitol (C) +0.4 +1.9 compare
stress nitrate 200 mM +0.4 +1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.4 +1.7 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X +0.4 +2.5 compare
carbon source L-Malic (C) +0.4 +2.5 compare
stress A22 0.04 mg/ml +0.5 +1.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.5 +0.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.6 +1.0 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.6 +1.1 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.6 +1.0 compare
carbon source D-Xylose (C) +0.7 +3.8 compare
stress Sisomicin 0.125 mg/ml +0.7 +3.4 compare