Fitness data for HSERO_RS15400 in Herbaspirillum seropedicae SmR1

ABC transporter permease
SEED: Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein
KEGG: branched-chain amino acid transport system substrate-binding protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -0.7 -2.4 compare
carbon source L-Arabinose (C) -0.7 -1.7 compare
stress sodium fluoride 100 mM -0.5 -1.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.5 -1.8 compare
nutrient casaminos -0.5 -2.4 compare
carbon source Carbon source 2-Deoxy-D-Ribose 5 mM -0.5 -2.0 compare
agar plate interaction Taped volatile agar plate with Trichoderma atroviridae IMI +0.4 +2.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.5 +1.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.5 +1.3 compare
carbon source pyruvate (C) +0.5 +2.0 compare
carbon source a-Ketoglutaric (C) +0.5 +2.8 compare
micoeukaryotes Dictyostellum sp.mixed culture-2 +0.6 +2.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.6 +2.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.6 +2.6 compare
carbon source D-Gluconic Acid (C) +0.6 +2.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.7 +3.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.7 +1.5 compare
carbon source D-Glucose-6-Phosphate (C) +0.8 +3.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.8 +2.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.9 +2.4 compare