Fitness data for HSERO_RS15365 in Herbaspirillum seropedicae SmR1

MarR family transcriptional regulator
SEED: Organic hydroperoxide resistance transcriptional regulator

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.9)


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group condition fitness t score  
agar plate interaction Taped volatile agar plate with Trichoderma atroviridae IMI -2.6 -3.3 compare
agar plate interaction Taped volatile agar plate with Trichoderma atroviridae IMI -2.1 -4.5 compare
agar plate interaction control Taped volatile agar plate with no fungus -2.0 -2.1 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.8X; growth supplemented with 0.4X LB -1.8 -2.8 compare
micoeukaryotes C.elegans, mixed culture-2 -1.8 -2.4 compare
carbon source L-Arabinose (C) -1.6 -2.4 compare
agar plate interaction control Taped volatile agar plate with no fungus -1.3 -1.8 compare
carbon source D-Sorbitol (C) -1.3 -2.8 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -1.1 -2.4 compare
carbon source a-Ketoglutaric (C) -1.0 -2.3 compare
plant Control soil assay; outgrowth in LB -1.0 -2.1 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -1.0 -1.9 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.8X -1.0 -1.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.9 -2.9 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -0.9 -1.9 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -0.9 -2.0 compare
carbon source L-Arabinose (C) -0.9 -2.3 compare
stress sodium fluoride 100 mM +0.9 +1.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +1.0 +1.4 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +1.3 +1.4 compare