Fitness data for HSERO_RS15350 in Herbaspirillum seropedicae SmR1

membrane protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.8)


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group condition fitness t score  
micoeukaryotes C.elegans, mixed culture-2 -2.5 -2.6 compare
micoeukaryotes Acanthamoeba sp., muxed culture-2 -2.3 -2.8 compare
micoeukaryotes C.elegans, mixed culture-1 -1.0 -1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.9 -1.7 compare
plant Control soil assay; outgrowth in LB -0.8 -1.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.8 +1.7 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.2X +0.8 +3.2 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.2X; growth supplemented with 0.4X LB +0.8 +1.7 compare
carbon source D-Ribose (C) +0.9 +1.5 compare
carbon source D,L-Lactate (C) +0.9 +1.9 compare
carbon source L-Rhamnose (C) +0.9 +1.7 compare
carbon source D-Galactose (C) +0.9 +2.0 compare
carbon source D-Sorbitol (C) +0.9 +2.2 compare
nutrient Min media with glucose +1.0 +2.0 compare
carbon source L-Fucose (C) +1.1 +1.7 compare
carbon source L-Asparagine (C) +1.1 +2.8 compare
carbon source D-Xylose (C) +1.2 +2.6 compare
carbon source D-Ribose (C) +1.3 +3.0 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +1.5 +2.0 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +2.1 +2.8 compare