Fitness data for HSERO_RS15340 in Herbaspirillum seropedicae SmR1

cytochrome BD oxidase subunit I
SEED: Cytochrome d ubiquinol oxidase subunit I (EC 1.10.3.-)
KEGG: cytochrome bd-I oxidase subunit I

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
micoeukaryotes Acanthamoeba sp., muxed culture-1 -3.7 -9.4 compare
micoeukaryotes C.elegans, mixed culture-1 -1.6 -5.2 compare
micoeukaryotes Acanthamoeba sp., muxed culture-2 -1.6 -4.9 compare
micoeukaryotes C.elegans, mixed culture-2 -1.2 -4.1 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.5X; growth supplemented with 0.4X LB -0.7 -2.9 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.7 -3.2 compare
nitrogen fixation control L-Malic (C) with ammonium chloride; anaerobic; 3 days -0.6 -3.8 compare
nitrogen fixation control L-Malic (C) with ammonium chloride; anaerobic; 8 days -0.6 -3.4 compare
carbon source D-Galactose (C) -0.6 -2.3 compare
carbon source D-Lactate (C) -0.5 -1.8 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.8X; growth supplemented with 0.4X LB -0.5 -1.5 compare
stress Lomefloxacin 0.012 mM -0.5 -1.6 compare
nitrogen fixation control D-Glucose (C) with ammonium chloride; anaerobic; 8 days -0.5 -2.7 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X -0.4 -1.8 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.4 +1.6 compare
vitamin No vitamins t1 +0.4 +1.9 compare
nutrient L-Histidine +0.5 +2.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.7 +1.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.8 +1.3 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X +2.2 +13.5 compare