Fitness data for HSERO_RS15320 in Herbaspirillum seropedicae SmR1

histidine kinase
SEED: Heavy metal sensor histidine kinase
KEGG: two-component system, OmpR family, heavy metal sensor histidine kinase CusS

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
micoeukaryotes Acanthamoeba sp., muxed culture-2 -1.4 -2.9 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -1.0 -3.0 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -0.9 -2.2 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -0.9 -2.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.9 -2.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.8 -2.3 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -0.7 -1.8 compare
carbon source D-Glucose-6-Phosphate (C) -0.7 -2.0 compare
nitrogen fixation control L-Malic (C) with ammonium chloride; anaerobic; 8 days -0.7 -4.0 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.6 -2.4 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X -0.6 -1.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.6 -1.8 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.8X -0.5 -3.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.5 +1.2 compare
carbon source L-Asparagine (C) +0.5 +1.8 compare
carbon source L-Malic (C) +0.6 +2.1 compare
carbon source D-Xylose (C) +0.7 +1.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.7 +1.7 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.2X; growth supplemented with 0.4X LB +0.7 +2.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.7 +0.9 compare