Fitness data for HSERO_RS15315 in Herbaspirillum seropedicae SmR1

transcriptional regulator
SEED: DNA-binding heavy metal response regulator
KEGG: two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.7)


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group condition fitness t score  
carbon source L-Arabinose (C) -1.4 -2.4 compare
agar plate interaction control Taped volatile agar plate with no fungus -1.2 -1.8 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.1 -1.9 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.0 -2.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -1.0 -1.7 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X -0.9 -1.5 compare
carbon source succinate (C) -0.9 -1.5 compare
carbon source D-Sorbitol (C) -0.8 -2.1 compare
carbon source D-Galactose (C) -0.8 -1.5 compare
agar plate interaction control Taped volatile agar plate with no fungus -0.8 -1.2 compare
supernatant control Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB -0.8 -1.0 compare
supernatant control Vogels_fungal_media 0.5X; growth supplemented with 0.4X LB -0.7 -1.8 compare
supernatant control Vogels_fungal_media 0.1X -0.7 -2.1 compare
carbon source Carbon source 2-Deoxy-D-Ribose 5 mM +0.7 +2.2 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.7 +1.5 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.8 +1.7 compare
stress nitrate 200 mM +0.8 +1.8 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.2X +0.8 +2.5 compare
supernatant control Vogels_fungal_media; pH 5.5 +0.9 +1.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +2.5 +1.4 compare