Fitness data for HSERO_RS15220 in Herbaspirillum seropedicae SmR1

GntR family transcriptional regulator
SEED: Transcriptional regulator, GntR family domain / Aspartate aminotransferase (EC 2.6.1.1)

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
plant Control soil assay; outgrowth in LB -0.7 -2.7 compare
micoeukaryotes Dictyostellum sp.mixed culture-1 -0.7 -2.9 compare
stress Sisomicin 0.125 mg/ml -0.4 -1.2 compare
carbon source Carbon source Phenylacetic 5 mM -0.4 -2.2 compare
plant Control soil assay; outgrowth in LB -0.4 -1.4 compare
nitrogen source nitrate (N); low aeration -0.4 -2.5 compare
carbon source L-Malic (C) +0.4 +1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.4 +1.6 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.4 +1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.4 +1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.4 +2.0 compare
carbon source D-Galactose (C) +0.4 +1.3 compare
agar plate interaction control Taped volatile agar plate with no fungus +0.4 +1.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.4 +1.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.4 +1.1 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.4 +1.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.4 +2.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.5 +2.5 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X +0.5 +3.0 compare
agar plate interaction Taped volatile agar plate with Trichoderma atroviridae IMI +0.7 +2.5 compare