Fitness data for HSERO_RS14995 in Herbaspirillum seropedicae SmR1

cystathionine beta-lyase
SEED: Cystathionine beta-lyase (EC 4.4.1.8)
KEGG: cystathionine beta-lyase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
supernatant control Vogels_fungal_media; pH 5.5 -0.8 -2.2 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X -0.8 -3.7 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X -0.7 -4.0 compare
supernatant Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X -0.7 -3.3 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X -0.7 -3.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.6 -2.2 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X -0.6 -3.3 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.6 -3.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.6 -1.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.6 -1.8 compare
r2a control R2A control -0.6 -3.7 compare
agar plate interaction control Taped volatile agar plate with no fungus -0.5 -1.5 compare
carbon source D-Glucose (C) +0.5 +1.5 compare
carbon source D-Sorbitol (C) +0.5 +2.3 compare
carbon source D-Glucose (C) +0.5 +2.2 compare
carbon source L-Fucose (C) +0.6 +3.2 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.6 +2.9 compare
carbon source D-Xylose (C) +0.7 +2.4 compare
carbon source D-Galactose (C) +0.7 +3.3 compare
stress Nickel (II) chloride 0.6 mM +0.9 +4.9 compare