Fitness data for HSERO_RS14710 in Herbaspirillum seropedicae SmR1

amino acid ABC transporter ATPase
SEED: Branched-chain amino acid transport ATP-binding protein LivF (TC 3.A.1.4.1)
KEGG: branched-chain amino acid transport system ATP-binding protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
carbon source L-Arabinose (C) -1.0 -1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.8 -1.3 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.7 -1.4 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.6 -1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.6 -1.8 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.6 -2.3 compare
nutrient L-Histidine -0.6 -2.6 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.6 -2.3 compare
carbon source pyruvate (C) -0.5 -1.4 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.8X -0.5 -1.9 compare
supernatant Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X -0.5 -2.0 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.5 -2.0 compare
supernatant control Vogels_fungal_media; pH 5.5 +0.5 +1.3 compare
vitamin No vitamins t1 +0.5 +1.8 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.2X +0.5 +2.2 compare
carbon source D-Glucose (C) +0.6 +2.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.6 +0.7 compare
plant Control soil assay; outgrowth in LB +0.6 +2.0 compare
micoeukaryotes Acanthamoeba sp., muxed culture-1 +0.6 +2.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.6 +0.8 compare