Fitness data for HSERO_RS14690 in Herbaspirillum seropedicae SmR1

amino acid ABC transporter periplasmic protein
SEED: Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein
KEGG: branched-chain amino acid transport system substrate-binding protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
nitrogen source nitrate (N); low aeration -0.8 -1.9 compare
carbon source L-Fucose (C) -0.7 -3.9 compare
stress Cisplatin 0.003 mg/ml -0.7 -2.4 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X -0.6 -3.1 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X -0.6 -2.3 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.2X; growth supplemented with 0.4X LB -0.6 -2.5 compare
nitrogen source nitrate (N); high aeration -0.5 -2.1 compare
carbon source D-Ribose (C) -0.5 -1.8 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.5X; growth supplemented with 0.4X LB -0.5 -2.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.5 +2.2 compare
carbon source D-Galactose (C) +0.5 +1.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.5 +1.5 compare
carbon source D-Xylose (C) +0.5 +1.7 compare
agar plate interaction control Taped volatile agar plate with no fungus +0.5 +1.1 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.5 +2.3 compare
carbon source L-Lactate (C) +0.6 +1.9 compare
agar plate interaction control Taped volatile agar plate with no fungus +0.7 +1.2 compare
stress Cobalt chloride 0.2 mM +0.8 +2.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +1.0 +1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +1.5 +1.3 compare