Fitness data for HSERO_RS14535 in Herbaspirillum seropedicae SmR1

nitrite reductase
SEED: Nitrite reductase [NAD(P)H] large subunit (EC 1.7.1.4)
KEGG: nitrite reductase (NAD(P)H) large subunit

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
nitrogen source nitrate (N); low aeration -4.2 -14.4 compare
nitrogen source nitrate (N); low aeration -4.1 -14.1 compare
nitrogen source nitrate (N); high aeration -3.7 -12.1 compare
nitrogen source nitrate (N); high aeration -3.6 -13.4 compare
supernatant control Vogels_fungal_media 0.1X -0.8 -5.5 compare
supernatant control Vogels_fungal_media 0.1X -0.7 -4.1 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X -0.6 -3.7 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X -0.5 -3.2 compare
plant Control soil assay; outgrowth in LB -0.5 -2.2 compare
supernatant Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X -0.4 -2.7 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.4 -2.0 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -0.4 -2.3 compare
supernatant Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X -0.4 -2.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.3 -1.9 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X -0.3 -2.4 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X -0.3 -2.0 compare
vitamin With vitamins t1 -0.3 -1.8 compare
agar plate interaction control Taped volatile agar plate with no fungus +0.4 +1.8 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.5X; growth supplemented with 0.4X LB +0.4 +2.5 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.4 +2.5 compare