Fitness data for HSERO_RS14510 in Herbaspirillum seropedicae SmR1

AraC family transcriptional regulator

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
carbon source L-Arabinose (C) -0.8 -1.3 compare
carbon source D-Gluconic Acid (C) -0.7 -2.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.6 -2.6 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -0.6 -1.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.6 -1.9 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.2X -0.6 -2.0 compare
agar plate interaction control Taped volatile agar plate with no fungus -0.5 -1.5 compare
carbon source L-Rhamnose (C) -0.5 -1.9 compare
carbon source L-Asparagine (C) +0.5 +2.1 compare
stress Cobalt chloride 0.2 mM +0.5 +1.7 compare
nitrogen source L-Proline (N) +0.6 +1.5 compare
supernatant control Vogels_fungal_media; pH 5.5 +0.6 +2.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.6 +1.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.6 +1.9 compare
stress Sisomicin 0.125 mg/ml +0.7 +2.1 compare
carbon source D-Mannose (C) +0.7 +2.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.7 +1.2 compare
stress A22 0.04 mg/ml +0.8 +2.1 compare
stress Lomefloxacin 0.012 mM +1.0 +2.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +1.2 +1.1 compare