Fitness data for HSERO_RS14500 in Herbaspirillum seropedicae SmR1

murein hydrolase transporter LrgA
SEED: Antiholin-like protein LrgA

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.8)


Add gene:

Or see all 244 experiments or choose conditions

group condition fitness t score  
carbon source Glycerol (C) -1.2 -2.0 compare
vitamin No vitamins t2 -1.2 -2.1 compare
stress A22 0.02 mg/ml -1.0 -2.1 compare
micoeukaryotes Dictyostellum sp.mixed culture-1 -1.0 -2.3 compare
carbon source Carbon source 2-Deoxyadenosine 5-monophosphate 2.5 mM -0.9 -1.3 compare
carbon source D-Lactate (C) -0.9 -1.1 compare
carbon source Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM -0.9 -2.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.8 -1.1 compare
control NoPredeControl -0.8 -0.7 compare
supernatant control Vogels_fungal_media 0.5X; growth supplemented with 0.4X LB +0.8 +1.8 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.8 +1.9 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.9 +0.8 compare
stress sodium fluoride 100 mM +0.9 +1.4 compare
micoeukaryotes C.elegans, mixed culture-2 +0.9 +1.4 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.9 +1.7 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +1.0 +1.8 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +1.2 +3.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +1.2 +2.9 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X +1.3 +3.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +1.7 +1.9 compare