Fitness data for HSERO_RS14045 in Herbaspirillum seropedicae SmR1

aldolase
SEED: Citrate lyase beta chain (EC 4.1.3.6)
KEGG: citrate lyase subunit beta / citryl-CoA lyase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.8)


Add gene:

Or see all 244 experiments or choose conditions

group condition fitness t score  
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -1.2 -2.3 compare
carbon source L-Lactate (C) -1.1 -1.3 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.2X -1.1 -2.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -1.0 -1.9 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.8X; growth supplemented with 0.4X LB -0.9 -1.4 compare
plant Control soil assay; outgrowth in LB -0.9 -1.5 compare
vitamin No vitamins t2 -0.9 -2.5 compare
carbon source D-Glucose (C) -0.8 -2.1 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.8 -2.6 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -0.8 -2.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.8 -1.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.8 -1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.8 -2.0 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.5X; growth supplemented with 0.4X LB +0.8 +2.9 compare
agar plate interaction control Taped volatile agar plate with no fungus +0.8 +2.2 compare
supernatant control Vogels_fungal_media 0.1X +0.8 +1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.8 +1.8 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.2X; growth supplemented with 0.4X LB +0.9 +2.4 compare
supernatant control Vogels_fungal_media 0.5X; growth supplemented with 0.4X LB +1.0 +3.0 compare
agar plate interaction control Taped volatile agar plate with no fungus +1.0 +1.2 compare