Fitness data for HSERO_RS14035 in Herbaspirillum seropedicae SmR1

C4-dicarboxylate ABC transporter
SEED: TRAP transporter solute receptor, unknown substrate 6

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.6 -2.3 compare
stress Sisomicin 0.125 mg/ml -0.6 -2.1 compare
nitrogen source L-Proline (N) -0.5 -1.9 compare
carbon source D-Galactose (C) -0.5 -1.8 compare
stress Lomefloxacin 0.012 mM -0.4 -1.5 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -0.4 -1.4 compare
stress Nickel (II) chloride 0.6 mM -0.4 -2.0 compare
carbon source L-Rhamnose (C) -0.3 -1.2 compare
r2a control R2A control -0.3 -1.8 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.3 +1.6 compare
micoeukaryotes Dictyostellum sp.mixed culture-1 +0.3 +1.9 compare
carbon source Glycerol (C) +0.4 +1.4 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.2X; growth supplemented with 0.4X LB +0.4 +1.4 compare
nitrogen source nitrate (N); high aeration +0.4 +2.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.4 +1.3 compare
control NoPredeControl +0.4 +1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.5 +2.0 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.6 +1.8 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.6 +2.5 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.9 +1.4 compare