Fitness data for HSERO_RS13970 in Herbaspirillum seropedicae SmR1

diguanylate cyclase
SEED: diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
carbon source L-Lactate (C) -0.4 -1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.4 -1.8 compare
nitrogen fixation control D-Glucose (C) with ammonium chloride; anaerobic; 3 days -0.3 -1.8 compare
stress Fusidic 0.025 mg/ml +0.3 +1.4 compare
nitrogen source Ammonium chloride (N); low aeration +0.4 +2.4 compare
carbon source L-Malic (C) +0.4 +1.6 compare
agar plate interaction control Taped volatile agar plate with no fungus +0.4 +1.4 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.4 +1.2 compare
carbon source D-Mannitol (C) +0.4 +1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.4 +1.4 compare
carbon source D-Glucose (C) +0.4 +1.4 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.4 +1.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.5 +1.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.5 +2.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.5 +1.4 compare
carbon source D-Glucose-6-Phosphate (C) +0.5 +2.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.5 +2.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.5 +1.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.7 +1.8 compare
stress Sisomicin 0.125 mg/ml +0.7 +2.2 compare