Fitness data for HSERO_RS13965 in Herbaspirillum seropedicae SmR1

single-stranded DNA exonuclease
SEED: Single-stranded-DNA-specific exonuclease RecJ (EC 3.1.-.-)
KEGG: single-stranded-DNA-specific exonuclease

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 2.6)


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group condition fitness t score  
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -4.0 -1.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -3.8 -1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -3.8 -1.4 compare
stress Cisplatin 0.003 mg/ml -3.7 -2.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -3.7 -1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -3.5 -1.2 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -3.5 -1.0 compare
supernatant control Vogels_fungal_media 0.5X; growth supplemented with 0.4X LB -3.5 -2.4 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -3.4 -1.1 compare
stress Cobalt chloride 0.2 mM -3.1 -2.5 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -3.0 -2.1 compare
carbon source D-Lactate (C) -3.0 -3.1 compare
stress Sisomicin 0.125 mg/ml -3.0 -1.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -2.9 -1.6 compare
carbon source L-Asparagine (C) -2.9 -3.6 compare
agar plate interaction control Taped volatile agar plate with no fungus -2.7 -1.8 compare
carbon source L-Glutamine (C) -2.7 -2.9 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -2.7 -2.2 compare
agar plate interaction control Taped volatile agar plate with no fungus -2.7 -1.6 compare
carbon source L-Asparagine (C) -2.6 -3.6 compare