Fitness data for HSERO_RS13935 in Herbaspirillum seropedicae SmR1

DNAase
SEED: Putative deoxyribonuclease YjjV
KEGG: TatD DNase family protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
carbon source m-Inositol (C) -0.9 -1.7 compare
carbon source D-Galactose (C) -0.9 -2.4 compare
carbon source m-Inositol (C) -0.7 -2.0 compare
agar plate interaction control Taped volatile agar plate with no fungus -0.7 -2.0 compare
carbon source L-Rhamnose (C) -0.7 -1.5 compare
supernatant control Vogels_fungal_media; pH 5.5 -0.6 -1.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.6 -1.5 compare
carbon source Xylitol (C) -0.6 -0.9 compare
control NoPredeControl +0.7 +1.2 compare
carbon source D-Glucose (C) +0.7 +3.1 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.7 +0.7 compare
nitrogen fixation L-Malic (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic acid; 8 days +0.7 +2.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.9 +2.7 compare
nitrogen fixation L-Malic (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic acid; 8 days +0.9 +3.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +1.2 +2.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +1.4 +1.6 compare
nitrogen fixation control L-Malic (C) with ammonium chloride; anaerobic; 3 days +1.5 +5.0 compare
nitrogen fixation control L-Malic (C) with ammonium chloride; anaerobic; 3 days +1.6 +10.5 compare
nitrogen fixation control L-Malic (C) with ammonium chloride; anaerobic; 8 days +4.1 +11.2 compare
nitrogen fixation control L-Malic (C) with ammonium chloride; anaerobic; 8 days +4.2 +10.5 compare